HoloNet.predicting.get_mgc_result_for_multiple_targets#
- HoloNet.predicting.get_mgc_result_for_multiple_targets(trained_multi_MGC_model_list, X, adj, used_gene_list, adata, device='cpu')#
Run the trained MGC model and get the generated expression profile of target genes.
- Parameters
- trained_multi_MGC_model_list
List[List[MGC_Model]] A list of multiple (repeated training) trained MGC model for generating the expression of target genes.
- X
Tensor The feature matrix used as the input of the trained_MGC_model_list.
- adj
Tensor The adjacency matrix used as the input of the trained_MGC_model_list.
- used_gene_list
List[str] The list of target gene names used as the target of the trained_MGC_model_list.
- adata
AnnData Annotated data matrix.
- trained_multi_MGC_model_list
- Return type
- Returns
: A dataframe for the generated expression of multiple genes in each cell.